Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887010.1_cds_XP_016441250.1_36630
CDS Infomation

[gene=LOC107766885] [db_xref=GeneID:107766885] [protein=auxin response factor 17-like] [protein_id=XP_016441250.1] [location=join(7206..8246,16249..16965)] [gbkey=CDS]
Sequence

ATGCCGCCTTCAACCACCGCCGTCCCCGCCGTAAGTAATGATGTGGACCCTACAGTCTGG
AAAGCAATCGCCGGCAACTCTGTCCAAATCCCAACCGTCGGTACCAGGGTTTACTACTTC
CCGCAAGGACACGCTGAACACGCCAACTGTGGGTCACCTATTTTCCTCTCCTCTCTTATC
CCTCCGTTTATTCTCTGTCGCGTACTCTCCGTCCGTTTTCTCGCTGATTCCGTTACCGAC
GAGGCTTATGCTAAAATTTTCCTGCTTCCGATTAATCAGAGCGAGGATAATAACGACGTT
GCTGTGAATATGAATGGTGACGTGGAGGATGCAGAAAACGAAGTCGTTTCATTCGTGAAG
ATTTTAACACCTTCGGATGCGAACAATGGGGGAGGTTTCTCTGTCCCGCGGTTCTGCGCT
GATTCGATACTCCCTAGGCTCAATTTCGTGGCTGAACCGCCGGTTCAGAATTTGTCTATT
CGCGATATTCATGGTTGTGTATGGGAGTTTCGGCACATTTATCGTGGCACGCCTCGCCGG
CATTTACTAACTACCGGCTGGAGCAAGTTCGTCAACAGTAAAAAGCTCGTCGCCGGTGAT
TCCGCGGTTTTCGTACGGAAAATTAACACCGGGGAACTTTACGTCGGAGTCCGACGAGCC
ACACGAGGAAACGACATTTGCGAGAGGTGGAATTCAACTGTTTTGAGAAGTACTGAACCA
ACCAGTAGCGGTGGGGAAGTTCGTTGGAGGACTGGGCAGGGGCGTGTGGCAACGGAGGCG
GTTGTGGAGGCAGCAGAAATGGCAGCACGGGGAATGGCGTTTGAGGTGTCGTGTTATCCG
CGGGCAGGCTGGGCAGATTTTGTGGTGAGGGCAGAAACAGTAGAGGCATCGTCAACTGTG
TTTTGGACCGTTGGTATGAGAGTTAAGATGGCTGTGGAGACGGAGGATTCATCTAGAACG
GCTTGCTTTCAAGGGACTGTTTCATCTGTCAATTTGCCTCAAAGTGGCCCTTGGCGTGGC
TCTCCATGGCGAATGCTTCAGATCACTTGGGATGAACCAGAAGTTCTTCAGTATGCTAAG
AGGGTGAATCCTTGGCAAGTTGAGTGTATTCTTCCAATCCCGCAGCTTCACTCCGGATTT
CCTCCATCAAAGAAGATAAAACTGCCAAATGGGTTGTTACCTGATGGAGAGGAAAGATTC
TTCTTGCCTATGACAGGGCTGAGTAATCCTTTGATTGGACTTTGTAGCCCATCGTTGGGC
AATTATACATCTTTTCCTGCGGGCATGCAGGGAGCCAGGCAAAATCAAATTTGTGTATCA
AGTTTATCCAATGTTAAAAGCAATAACAACCTTGGGTTGGGCACTGACAATAGCTTAGAT
GAAGAATTCAAGCCAAAGCTTGAGAGTGTATCCACCAAGCTGAACATTGGCAGTTCATAT
TCAGACAACTTCTCTCCGGATAGTCAGAGCAGTGTACATTTTTGGGACAATGAGCTGGTT
ACAAAACCGGGTTCCAGCTCCTTGACAAAAGTTCGTGTCAATTCTTTCCAGCTATTTGGT
AAGGTCATCCATGTTGAACCTGTTGAAGGAGGTTTTGATGGTTTCGGTTGCTCTGAAAAT
GATAGCATTGAAGTGTTTAAAGAGATAGATGGTGCATTCAAGTCTAACATTTCTCTGAGT
AAACCTTATATCGAGATGTTTGACAGTCTTGATGTCCAACACCAAAGAGCCTCAGCTGTC
GAAGCATGTTCCTTATGA

Peptide Sequence

PEP ID

XP_016441250.1
PEP Infomation

PREDICTED: auxin response factor 17-like [Nicotiana tabacum]
Sequence

MPPSTTAVPAVSNDVDPTVWKAIAGNSVQIPTVGTRVYYFPQGHAEHANCGSPIFLSSLI
PPFILCRVLSVRFLADSVTDEAYAKIFLLPINQSEDNNDVAVNMNGDVEDAENEVVSFVK
ILTPSDANNGGGFSVPRFCADSILPRLNFVAEPPVQNLSIRDIHGCVWEFRHIYRGTPRR
HLLTTGWSKFVNSKKLVAGDSAVFVRKINTGELYVGVRRATRGNDICERWNSTVLRSTEP
TSSGGEVRWRTGQGRVATEAVVEAAEMAARGMAFEVSCYPRAGWADFVVRAETVEASSTV
FWTVGMRVKMAVETEDSSRTACFQGTVSSVNLPQSGPWRGSPWRMLQITWDEPEVLQYAK
RVNPWQVECILPIPQLHSGFPPSKKIKLPNGLLPDGEERFFLPMTGLSNPLIGLCSPSLG
NYTSFPAGMQGARQNQICVSSLSNVKSNNNLGLGTDNSLDEEFKPKLESVSTKLNIGSSY
SDNFSPDSQSSVHFWDNELVTKPGSSSLTKVRVNSFQLFGKVIHVEPVEGGFDGFGCSEN
DSIEVFKEIDGAFKSNISLSKPYIEMFDSLDVQHQRASAVEACSL

Transcript Sequence

Gene sequence data has not been registered.